Categorización de los énfasis de los proyectos de investigación en malaria financiados por Colciencias durante 1995-2005 / Classification of the scope of research projects on malaria funded by Colciencias during 1995-2005

RESUMEN Objetivo Identificar los principales objetivos y énfasis de los proyectos de investigación en malaria financiada por Colciencias entre 1995 y 2005. Métodos Para la identificación del énfasis de los proyectos de investigación en malaria se utilizó el sistema de clasificación en investigación en salud desarrollado por la Colaboración de Investigación Clínica de Gran Bretaña: "Health Research Classification System" (HRCS). Resultados Se encontró que la investigación en malaria durante este periodo tiene énfasis en determinantes y causas, las principales ciudades beneficiadas con la financiación de proyectos de investigación en malaria son instituciones pertenecientes a Bogotá, Medellín y Cali. Conclusiones Estos proyectos permitieron el fortalecimiento en núcleos de investigación en malaria en las líneas de biología molecular, producción de vacunas, identificación de resistencia a antimaláricos y estudios relacionados con el cambio climático; algunos de sus resultados con capacidad de afectar políticas en malaria y formación de recurso humano.(AU)

ABSTRACT Objective To identify the main focus of research projects on malaria funded by Colciencias between 1995 and 2005. Methodology The Health Research Classification System (HRCS), developed by The UK Clinical Research Collaboration (UKCRC), was used for identifying the emphasis of research works on Malaria. Results During this period, research on malaria was mainly directed to etiology; the main cities benefited by the funding of research projects on malaria are institutions from Bogotá, Medellín and Cali. Conclusions These type of projects improve the strengthening of malaria research centers in areas such as molecular biology, production of vaccines, identification of resistance to antimalarial treatment, and climate change; some of the results obtained can affect policies and training of human resources on malaria.(AU)

[Classification of the scope of research projects on malaria funded by Colciencias during 1995-2005]. / Categorización de los énfasis de los proyectos de investigación en malaria financiados por Colciencias durante 1995-2005.

OBJECTIVE: To identify the main focus of research projects on malaria funded by Colciencias between 1995 and 2005. METHODOLOGY: The Health Research Classification System (HRCS), developed by The UK Clinical Research Collaboration (UKCRC), was used for identifying the emphasis of research works on Malaria. RESULTS: During this period, research on malaria was mainly directed to etiology; the main cities benefited by the funding of research projects on malaria are institutions from Bogotá, Medellín and Cali. CONCLUSIONS: These type of projects improve the strengthening of malaria research centers in areas such as molecular biology, production of vaccines, identification of resistance to antimalarial treatment, and climate change; some of the results obtained can affect policies and training of human resources on malaria.

OBJETIVO: Identificar los principales objetivos y énfasis de los proyectos de investigación en malaria financiada por Colciencias entre 1995 y 2005. MÉTODOS: Para la identificación del énfasis de los proyectos de investigación en malaria se utilizó el sistema de clasificación en investigación en salud desarrollado por la Colaboración de Investigación Clínica de Gran Bretaña: "Health Research Classification System" (HRCS). RESULTADOS: Se encontró que la investigación en malaria durante este periodo tiene énfasis en determinantes y causas, las principales ciudades beneficiadas con la financiación de proyectos de investigación en malaria son instituciones pertenecientes a Bogotá, Medellín y Cali. CONCLUSIONES: Estos proyectos permitieron el fortalecimiento en núcleos de investigación en malaria en las líneas de biología molecular, producción de vacunas, identificación de resistencia a antimaláricos y estudios relacionados con el cambio climático; algunos de sus resultados con capacidad de afectar políticas en malaria y formación de recurso humano.

Vibrational spectra of the two hydrates of strontium oxalate.

The infrared and Raman spectra of the two hydrates of strontium oxalate, SrC2O4⋅H2O and SrC2O4⋅2H2O, were recorded and discussed on the basis of their structural peculiarities and in comparison with the spectra of the related calcium oxalates and other previously investigated metallic oxalates.

The combined expression patterns of Ikaros isoforms characterize different hematological tumor subtypes.

A variety of genetic alterations are considered hallmarks of cancer development and progression. The Ikaros gene family, encoding for key transcription factors in hematopoietic development, provides several examples as genetic defects in these genes are associated with the development of different types of leukemia. However, the complex patterns of expression of isoforms in Ikaros family genes has prevented their use as clinical markers. In this study, we propose the use of the expression profiles of the Ikaros isoforms to classify various hematological tumor diseases. We have standardized a quantitative PCR protocol to estimate the expression levels of the Ikaros gene exons. Our analysis reveals that these levels are associated with specific types of leukemia and we have found differences in the levels of expression relative to five interexonic Ikaros regions for all diseases studied. In conclusion, our method has allowed us to precisely discriminate between B-ALL, CLL and MM cases. Differences between the groups of lymphoid and myeloid pathologies were also identified in the same way.

Incidencia de histamina y de bacterias indicadoras de calidad higiénica, en filetes, ruedas y trozos de pescado de especies pelágicas comercializadas en un mercado de pescado de la isla de Margarita (Venezuela) / Incidence histamine and hygienic quality indicators´s bacteria in fillets, slice and pieces pelagic fish´s marketing in one fish´s market of Margarita´s Island (Venezuela)

Se estudió la incidencia de histamina y de bacterias indicadoras de manejo higiénico en filetes, ruedas y trozos de diez especies de pescado en estado fresco, (Euthynnus alletteratus; Caranx latus; Ophisthonema oglinum; Alectis crinitus; Sardinella aurita; Thunnus alalunga; Sarda sarda; Scomberomorus cavalla; Coryphaena hippurus y Xyphias gladius), comercializadas en un mercado de pescado de Isla de Margarita (Venezuela). Según normas COVENIN se enumeraron (UFC g-1) aerobios a 25 y 32 °C, coliformes fecales y Escherichia coli (NMP g-1); histamina (mg/100 g) y pH. También recuentos (UFC g-1) de enterobacterias (ICMSF) y bacterias descarboxiladoras de histidina (Niven y otros). Todos los recuentos de aerobios a 25 °C excedieron el valor m (Log10 = 5,70 UFC g-1) fijado por ICMSF (1986). La prueba r de Pearson indicó que los recuentos a 25 y 32 °C estuvieron altamente relacionados (n = 90; r = 0,89; p < 0,01). E. coli superó en el 76% de las muestras el valor m (Log10 = 1,04 NMP g-1). Las mayores cifras de histamina se detectaron en T. alalunga (promedio 43,5 mg/100 g en uno de tres muestreos); seguido por S. aurita (promedios de 23,7 y 28,0 mg/100 g respectivamente, en dos muestreos). Sólo en muestras de T. alalunga se detectaron olores penetrantes y músculos con elasticidad disminuida. Estos datos y la observación de factores adversos, tales como contacto directo con superficies y utensilios sucios, restos de vísceras, desangrado deficiente, presencia de insectos, utilización de agua no potable y la exposición a temperaturas no apropiadas, reflejan que la manipulación del pescado no fue adecuada. Se recomienda que inspectores sanitarios implementen acciones tendentes a corregir estas deficiencias.

The incidence of histamine and of bacteria that indicate hygienic handling of fillets, slices and pieces of ten pelagic fresh fish (Euthynnus alletteratus; Caranx latus; Ophisthonema oglinum; Alectis crinitus; Sardinella aurita; Thunnus alalunga; Sarda sarda; Scomberomorus cavalla; Coryphaena hippurus and Xyphias gladius), sold in a fish market at Margarita Island (Venezuela) was assessed. According to COVENIN´s norms, total aerobic plate count (FCU g-1) at 25 and 32 °C; fecal coliforms and Escherichia coli (MPN g-1); histamine (mg/100 g) and pH were measured. Also, members of the Enterobacteriaceae family (FCU g-1) and histamine producing bacteria were counted, according to ICMSF and Niven et al respectively. All total aerobic plate count at 25 °C surpassed the m number (Log10 = 5.70 CFU g-1) established by ICMSF (1986). The Pearson test (r) showed that bacteria total counts at 25 and 32 °C were highly related (n = 90; r = 0.89; p < 0.01). E. coli exceeded in 76% of samples the number (Log10 = 1.04 MPN g-1). Histamine biggest numbers were detected in T. alalunga (average 43.5 mg/100 g in one of three samplings), followed by S. aurita (averages of 23.7 and 28.0 mg/100 g respectively, in two samplings). Only in T. alalunga samples were penetrating odors detected and muscles with reduced elasticity. This data and the adverse factors observed, such as: fish in direct contact with dirty areas and utensils, leftover viscera, faulty bleeding, presence of insects, use of non potable water and the exposition of fish at inappropriate temperatures, revealed the handling of fish was not suitable. It is recommended that sanitary officers carry out actions necessary to correct these deficiencies.

Evaluación microbiológica y detección de enterotoxinas estafilococcicas en ensaladas de moluscos y vegetales / Microbiological evaluation and staphylococcus aureus enterotoxin detection in shellfish and vegetable salads

Un importante renglón de la pesca en el oriente de Venezuela es el de los moluscos. Las inadecuadas condiciones higiénicas cuando se preparan alimentos con estos productos y su venta en las playas señalan la importancia de ejercer un estricto control sanitario. El objetivo del trabajo fue evaluar la calidad microbiológica y detectar enterotoxinas de Staphylococcus aureus en ensaladas de moluscos con vegetales vendidas en las playas de la Isla de Margarita, Venezuela en los años 2004-2005. Se analizaron 63 unidades de muestra pertenecientes a 21 muestras. El 47,6 por ciento de las unidades superó los 10 NMP/g de E coli. El 79,3 por ciento tuvo recuentos mayores a 104 UFC/g de microorganismos acidúricos y el 57,1 por ciento mayor a 105 UFC/g de aerobios mesófilos. Se detectaron enterotoxinas estafilococcicas en el 8 por ciento de las muestras, (4,8 por ciento del tipo A y 3,2 por ciento del tipo B). En general, el 64,3 por ciento de las muestras no cumplió alguno de los requisitos internos del laboratorio de microbiología. Se halló relación significativa (r de Pearson) entre los recuentos de aerobios mesófilos y los de microorganismos acidúricos (r= 0,52; P<0,05), al igual que entre los coliformes fecales y S. aureus (r= 0,43; P<0,05), sugiriendo el incumplimiento de varias normas higiénicas, establecidas por organismos de la salud pública. Se concluye que estas ensaladas presentan un alto riesgo de generar problemas de salud a quienes las consumen.

Mollusks represent an important fishing product in Venezuela’s easthern region. Inadequate hygienic conditions applied in its preparation and sale at the beaches indicate the importance of a strict sanitary control. The objective of this research was to evaluate the microbiological quality and detect enterotoxins of Staphylococcus aureus in mollusks and vegetable salads sold at Margarita Island beaches during 2004-2005. Sixty three sample units were analyzed from to 21 samples, finding that 47.6% of them surpassed the 10 MPN/g of E coli. 79.3% had counts higher than 105CFU/g of aciduric microorganisms, and 57.1% higher than 104CFU/g of mesophilic aerobic. Staphylococcal enterotoxins were detected in 8% of the samples (of 4.8% type A and 3.2% of type B). In general, 64.3% of the samples did not fulfill some of the microbiological requirements. A significant relation (r of Pearson) exists between the counts of mesophilic aerobic and those of aciduric microorganisms (r= 0.52; P<0.05), as well as between fecal coliforms and S. aureus (r= 0.43; P<0.05). These findings suggest the breach of several hygienic norms. As a conclusion, these salads convey a high risk of generating health problems to those who consume them.

A revertant of the major founder Native American haplogroup C common in populations from northern South America.

We examined the mtDNA RFLP diversity of 17 Native American populations from Colombia. Five of the populations studied were found to have variable frequencies of a mtDNA type lacking the characteristic changes of haplogroups A-D. Sequencing of mtDNA HVS-I and II showed that this "null" RFLP type carries all the substitutions characteristic of Native American founder lineage C. A back mutation has therefore recreated the +13,259 HincII/-13,262 AluI restriction sites that tipify RFLP haplogroup C. This revertant C lineage is further characterized by three changes in HVS-II sequence: C/T transitions at positions 115 and 152, and the deletion of an A residue at position 116. This lineage is observed at high frequency mostly in populations from Greenberg's Equatorial-Tucano linguistic family. Genetic structure analyses are consistent with the reversion mutation occurring at an early stage during the tribalization process.

[Genetic susceptibility and risk of gastric cancer in a human population of Cauca, Colombia]. / Susceptibilidad genética y riesgo de cáncer gástrico en una población del Cauca.

Gastric cancer (GC) is the main cause of mortality by cancer in Colombia. Glutathione S-transferase (GST) enzymes are involved in the detoxification of many environmental carcinogens. The homozygous deletions of glutathione S-transferase M1 (GSTM1-0) and glutathione S-transferase T1 (GSTT1-0) have been associated with several types of cancer. The risk to develop GC has been associated with environmental factors and Helicobacter pylori infection. The tumor necrosis factor (TNF-alpha) and its levels are increased in patients infected with H. pylori. A G/ A transition in the position -308 of the promoter of the TNF-alpha has been related in several studies to an increased expression of the gene and is associated with susceptibility to GC. The association of these polymorphisms with GC and the interaction with other risk factors (life style) were investigated. Blood samples were obtained from 46 GC patients and 96 controls. The logistic regression model was used to obtain the odds ratio (OR) and their 95% confidence intervals. These statistics established the association between the enzymatic polymorphisms and GC and between other independent factors and GC. The frequency of the TNF-alpha polymorphism in people infected with H. pylori was 18% in the GC population and 7% in the control group. This transition was not significantly associated with H. pylori infection and GC. The frequencies of the deletion polymorphisms for patients and controls were as follows: GSTM1 65.2% and 37.5%; GSTT1 17.4% and 14.6%. These results suggested that the GSTM1 deletion polymorphism was associated with an increased risk of gastric cancer (OR of 5.5; 95%CI, 1.7-17.2). Furthermore, other risk factors such as H. pylori infection (OR 5.58, CI 1.8-17.2), smoking (OR 6.70, CI 2.2-20.3) and alcohol intake (OR 3.27, CI 1.1-9.4) were associated with GC.

Susceptibilidad genética y riesgo de cáncer gástrico en una población del Cauca / Genetic susceptibility and risk of gastric cancer in a human population of Cauca, Colombia

El cáncer gástrico es la principal causa de mortalidad por cáncer en Colombia. El riesgo de desarrollar cáncer gástrico se ha asociado con factores ambientales y con la infección por Helicobacter pylori. Las enzimas glutatión-S-transferasas están involucradas en la Desintoxicación de varios carcinógenos ambientales. Las deleciones homocigóticas de glutatión-S-transferasa M1 (GSTM1-0) y glutatión-S-transferasa T1 (GSTT1-0) se han asociado con algunos tipos de cáncer. Los niveles del factor de necrosis tumoral (FNT alfa ) están aumentados en pacientes infectados por H. pylori. Una transición G/A en la posición -308 del promotor del FNT-alfa se ha visto relacionada en algunos estudios con un incremento en la expresión del gen, y está asociada con la susceptibilidad a cáncer gástrico. Se investigó la asociación de estos polimorfismos con cáncer gástrico y la interacción con otros factores de riesgo (estilo de vida). Se obtuvieron muestras de sangre de 46 pacientes con cáncer gástrico y 96 controles. Se empleó el modelo de regresión logística para obtener la razón de posibilidades (OR) y sus intervalos de confianza del 95% y, así, establecer la asociación entre los polimorfismos enzimáticos y el cáncer gástrico, y entre otros factores independientes y esta enfermedad. Las frecuencias de los polimorfismos de deleción en pacientes y controles fueron: para la GSTM1, 65,2% y 37,5%, y para la GSTT1, 17,4% y 14,6%, respectivamente. La frecuencia del polimorfismo G/A del FNT alfa en las personas infectadas con H. pylori fue de 18% en la población con cáncer gástrico y de 7% en el grupo control. Nuestros resultados sugieren que el polimorfismo de deleción de GSTM1 puede estar asociado con un riesgo aumentado de cáncer gástrico (OR 5,5; IC95%, 1,7-17,2). Igualmente, nuestros datos muestran que otros factores de riesgo como la infección por H. pylori y el consumo de cigarrillo y alcohol están asociados con este tipo de cáncer (OR 5,58; IC95% 1,81-17,19; OR 6,70; IC95%, 2,20-20,30 y OR 3,27; IC95% 1,14-9,4, respectivamente).

Gastric cancer (GC) is the main cause of mortality by cancer in Colombia. Glutathione Stransferase (GST) enzymes are involved in the detoxification of many environmental carcinogens. The homozygous deletions of glutathione S-transferase M1 (GSTM1-0) and glutathione Stransferase T1 (GSTT1-0) have been associated with several types of cancer. The risk to develop GC has been associated with environmental factors and Helicobacter pylori infection. The tumor necrosis factor (TNF-alpha ) and its levels are increased in patients infected with H. pylori. A G/A transition in the position -308 of the promoter of the TNF-alpha has been related in several studies to an increased expression of the gene and is associated with susceptibility to GC. The association of these polymorphisms with GC and the interaction with other risk factors (life style) were investigated. Blood samples were obtained from 46 GC patients and 96 controls. The logistic regression model was used to obtain the odds ratio (OR) and their 95% confidence intervals. These statistics established the association between the enzymatic polymorphisms and GC and between other independent factors and GC. The frequency of the TNF-alpha polymorphism in people infected with H. pylori was 18% in the GC population and 7% in the control group. This transition was not significantly associated with H. pylori infection and GC. The frequencies of the deletion polymorphisms for patients and controls were as follows: GSTM1 65.2% and 37.5%; GSTT1 17.4% and 14.6%. These results suggested that the GSTM1 deletion polymorphism was associated with an increased risk of gastric cancer (OR of 5.5; 95%CI, 1.7-17.2). Furthermore, other risk factors such as H. pylori infection (OR 5.58,CI 1.8-17.2), smoking (OR 6.70, CI 2.2-20.3) and alcohol intake (OR 3.27, CI 1.1-9.4) were associated with GC.

Y-chromosome evidence for differing ancient demographic histories in the Americas.

To scrutinize the male ancestry of extant Native American populations, we examined eight biallelic and six microsatellite polymorphisms from the nonrecombining portion of the Y chromosome, in 438 individuals from 24 Native American populations (1 Na Dené and 23 South Amerinds) and in 404 Mongolians. One of the biallelic markers typed is a recently identified mutation (M242) characterizing a novel founder Native American haplogroup. The distribution, relatedness, and diversity of Y lineages in Native Americans indicate a differentiated male ancestry for populations from North and South America, strongly supporting a diverse demographic history for populations from these areas. These data are consistent with the occurrence of two major male migrations from southern/central Siberia to the Americas (with the second migration being restricted to North America) and a shared ancestry in central Asia for some of the initial migrants to Europe and the Americas. The microsatellite diversity and distribution of a Y lineage specific to South America (Q-M19) indicates that certain Amerind populations have been isolated since the initial colonization of the region, suggesting an early onset for tribalization of Native Americans. Age estimates based on Y-chromosome microsatellite diversity place the initial settlement of the American continent at approximately 14,000 years ago, in relative agreement with the age of well-established archaeological evidence.